SidaGhanaV1, Main, Exploration, bibRecord, 001197

Natural infection of chimpanzees with new lentiviruses related to HIV‐1/SIVcpz

Identifieur interne : 001197 ( Main/Exploration ); précédent : 001196; suivant : 001198

Natural infection of chimpanzees with new lentiviruses related to HIV‐1/SIVcpz

Auteurs : Jun Takehisa [Japon] ; Blaise Bikandou [Japon, République du Congo] ; Eiji Ido [Japon] ; Innocent Mboudjeka [Japon] ; Reine M'Vouenze [République du Congo] ; Marie-Yvonne Nzoukoudi [République du Congo] ; Yosuke Harada [Japon] ; Yumi Yamaguchi-Kabata [Japon] ; Tomoyuki Miura [Japon] ; Michel M'Pandi [République du Congo] ; Henri Jopseph Parra [République du Congo] ; Pierre M'Pelé [République du Congo] ; Masanori Hayami [Japon]

Source :

Journal of Medical Primatology [ 0047-2565 ] ; 1999-08-10.

RBID : ISTEX:9C9AA36799589794800DFD0D19DFDF81869CB7D3

English descriptors

Abstract

Abstract: To determine newly identified lentiviruses, termed simian immunodeficiency virus (SIV)cpz97CG4 and SIVcpz97CG6, from two wild‐captured juvenile brother chimpanzees in the Republic of Congo, subgenomic pol (integrase, 288 bp), 5′tat/rev‐env C1 (including vpu, 354 bp) and env (C2‐C4, 544 bp) gene fragments were amplified and sequenced. The analysis revealed significantly discordant phylogenetic positions of SIVcpz97CG in each genomic region. In the trees derived from partial env sequences (V3), both SIVcpz strains clustered in human immunodeficiency virus type 1 (HIV‐1) subtype A. However, in the trees derived from partial pol (integrase) and 5′tat/rev‐env C1 (including vpu) sequences, they clustered independently from any of the known HIV‐1 subtypes. Especially, in the 5′tat/rev‐vpu tree, they branched before the root of HIV‐1 group M. These findings suggest that these Congolese SIVcpz genomes are mosaic, probably due to a recombinational event in the recent past, and it provides evidence for a rather recently occurring cross‐species transmission between humans and chimpanzees.

Url:

https://api.istex.fr/document/9C9AA36799589794800DFD0D19DFDF81869CB7D3/fulltext/pdf

DOI: 10.1111/j.1600-0684.1999.tb00266.x

Affiliations:

Links toward previous steps (curation, corpus...)

to stream Istex, to step Corpus: 000934
to stream Istex, to step Curation: 000934
to stream Istex, to step Checkpoint: 000705
to stream Main, to step Merge: 001287
to stream Main, to step Curation: 001197

Le document en format XML

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<author><name sortKey="Miura, Tomoyuki" sort="Miura, Tomoyuki" uniqKey="Miura T" first="Tomoyuki" last="Miura">Tomoyuki Miura</name>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Central africa</term>
<term>Chimpanzee</term>
<term>Chimpanzee lentivirus</term>
<term>Core antigens</term>
<term>Democratic republic</term>
<term>Discordant phylogenetic positions</term>
<term>Genetic characterization</term>
<term>Genetic diversity</term>
<term>Genomic</term>
<term>Genomic region</term>
<term>Hayami</term>
<term>Human blood products</term>
<term>Human breast milk</term>
<term>Human immunodeficiency virus type</term>
<term>Immunodeficiency</term>
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<term>Nucleotide substitutions</term>
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<term>Phylogenetic</term>
<term>Phylogenetic positions</term>
<term>Primer</term>
<term>Recombinational event</term>
<term>Same cage</term>
<term>Simian immunodeficiency virus</term>
<term>Sivcpz</term>
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<term>Subtype</term>
<term>Subtypes</term>
<term>Takehisa</term>
<term>Troglodytes</term>
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<term>Unclassified</term>
<term>Unclassified subtype</term>
<term>Viral pathogenesis</term>
<term>Virus research</term>
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<term>Chimpanzee lentivirus</term>
<term>Core antigens</term>
<term>Democratic republic</term>
<term>Discordant phylogenetic positions</term>
<term>Genetic characterization</term>
<term>Genetic diversity</term>
<term>Genomic</term>
<term>Genomic region</term>
<term>Hayami</term>
<term>Human blood products</term>
<term>Human breast milk</term>
<term>Human immunodeficiency virus type</term>
<term>Immunodeficiency</term>
<term>Integrase</term>
<term>Juvenile brother chimpanzees</term>
<term>Kyoto japan</term>
<term>Kyoto university</term>
<term>Lentivirus</term>
<term>Lentiviruses</term>
<term>Natural infection</term>
<term>Nucleotide sequences</term>
<term>Nucleotide substitutions</term>
<term>Other subtypes</term>
<term>Phylogenetic</term>
<term>Phylogenetic positions</term>
<term>Primer</term>
<term>Recombinational event</term>
<term>Same cage</term>
<term>Simian immunodeficiency virus</term>
<term>Sivcpz</term>
<term>Sivcpz strains</term>
<term>Subtype</term>
<term>Subtypes</term>
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<term>Troglodytes</term>
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<front><div type="abstract">Abstract: To determine newly identified lentiviruses, termed simian immunodeficiency virus (SIV)cpz97CG4 and SIVcpz97CG6, from two wild‐captured juvenile brother chimpanzees in the Republic of Congo, subgenomic pol (integrase, 288 bp), 5′tat/rev‐env C1 (including vpu, 354 bp) and env (C2‐C4, 544 bp) gene fragments were amplified and sequenced. The analysis revealed significantly discordant phylogenetic positions of SIVcpz97CG in each genomic region. In the trees derived from partial env sequences (V3), both SIVcpz strains clustered in human immunodeficiency virus type 1 (HIV‐1) subtype A. However, in the trees derived from partial pol (integrase) and 5′tat/rev‐env C1 (including vpu) sequences, they clustered independently from any of the known HIV‐1 subtypes. Especially, in the 5′tat/rev‐vpu tree, they branched before the root of HIV‐1 group M. These findings suggest that these Congolese SIVcpz genomes are mosaic, probably due to a recombinational event in the recent past, and it provides evidence for a rather recently occurring cross‐species transmission between humans and chimpanzees.</div>
</front>
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<affiliations><list><country><li>Japon</li>
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<region><li>Région du Kansai</li>
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<name sortKey="Bikandou, Blaise" sort="Bikandou, Blaise" uniqKey="Bikandou B" first="Blaise" last="Bikandou">Blaise Bikandou</name>
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<name sortKey="Hayami, Masanori" sort="Hayami, Masanori" uniqKey="Hayami M" first="Masanori" last="Hayami">Masanori Hayami</name>
<name sortKey="Hayami, Masanori" sort="Hayami, Masanori" uniqKey="Hayami M" first="Masanori" last="Hayami">Masanori Hayami</name>
<name sortKey="Ido, Eiji" sort="Ido, Eiji" uniqKey="Ido E" first="Eiji" last="Ido">Eiji Ido</name>
<name sortKey="Mboudjeka, Innocent" sort="Mboudjeka, Innocent" uniqKey="Mboudjeka I" first="Innocent" last="Mboudjeka">Innocent Mboudjeka</name>
<name sortKey="Miura, Tomoyuki" sort="Miura, Tomoyuki" uniqKey="Miura T" first="Tomoyuki" last="Miura">Tomoyuki Miura</name>
<name sortKey="Yamaguchi Abata, Yumi" sort="Yamaguchi Abata, Yumi" uniqKey="Yamaguchi Abata Y" first="Yumi" last="Yamaguchi-Kabata">Yumi Yamaguchi-Kabata</name>
<name sortKey="Yamaguchi Abata, Yumi" sort="Yamaguchi Abata, Yumi" uniqKey="Yamaguchi Abata Y" first="Yumi" last="Yamaguchi-Kabata">Yumi Yamaguchi-Kabata</name>
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<country name="République du Congo"><noRegion><name sortKey="Bikandou, Blaise" sort="Bikandou, Blaise" uniqKey="Bikandou B" first="Blaise" last="Bikandou">Blaise Bikandou</name>
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<name sortKey="M Pandi, Michel" sort="M Pandi, Michel" uniqKey="M Pandi M" first="Michel" last="M'Pandi">Michel M'Pandi</name>
<name sortKey="M Pele, Pierre" sort="M Pele, Pierre" uniqKey="M Pele P" first="Pierre" last="M'Pelé">Pierre M'Pelé</name>
<name sortKey="M Vouenze, Reine" sort="M Vouenze, Reine" uniqKey="M Vouenze R" first="Reine" last="M'Vouenze">Reine M'Vouenze</name>
<name sortKey="Nzoukoudi, Marie Vonne" sort="Nzoukoudi, Marie Vonne" uniqKey="Nzoukoudi M" first="Marie-Yvonne" last="Nzoukoudi">Marie-Yvonne Nzoukoudi</name>
<name sortKey="Parra, Henri Jopseph" sort="Parra, Henri Jopseph" uniqKey="Parra H" first="Henri Jopseph" last="Parra">Henri Jopseph Parra</name>
</country>
</tree>
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</record>

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	Le SIDA au Ghana (serveur d'exploration)
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Le SIDA au Ghana (serveur d'exploration)

Natural infection of chimpanzees with new lentiviruses related to HIV‐1/SIVcpz

Natural infection of chimpanzees with new lentiviruses related to HIV‐1/SIVcpz

Source :

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri